Public Information for Job 230

Created By: demo
Created At: Tue, 31 Mar 2020 12:34:20 -0500

Input Dataset: 2020 Mar/COVID-19

Last Submitted At: Tue, 31 Mar 2020 12:34:20 -0500
Last Finished At: Tue, 31 Mar 2020 12:35:01 -0500 (41s)

Source Code

# What are the most mentioned antivirals? p: Paper = input; o: output top(500) of string weight int; stopwords: set of string = stop_words(); # store all words used in this paper's body bodyWords: set of string; foreach (i: int; def(p.body_text[i])) { foreach (m: int; def(p.body_text[i].body[m])) { paragraphWords: array of string = splitall(lowercase(p.body_text[i].body[m].text), " "); foreach (j: int; !contains(stopwords, paragraphWords[j])) # match only english words if (match("^[a-z]*vir$", paragraphWords[j])) add(bodyWords, paragraphWords[j]); } } words := values(bodyWords); foreach (k: int; def(words[k])) o << words[k] weight 1;

Output

Job Output Size: 5.52k

o[] = oseltamivir, 852.0
o[] = zanamivir, 411.0
o[] = acyclovir, 343.0
o[] = ganciclovir, 262.0
o[] = cidofovir, 206.0
o[] = lopinavir, 123.0
o[] = peramivir, 121.0
o[] = ritonavir, 121.0
o[] = tenofovir, 110.0
o[] = favipiravir, 105.0
o[] = valganciclovir, 85.0
o[] = sofosbuvir, 70.0
o[] = adefovir, 69.0
o[] = aciclovir, 66.0
o[] = valacyclovir, 66.0
o[] = nelfinavir, 65.0
o[] = remdesivir, 61.0
o[] = famciclovir, 58.0
o[] = entecavir, 51.0
o[] = servir, 42.0
o[] = abacavir, 39.0
o[] = valaciclovir, 39.0
o[] = indinavir, 38.0
o[] = laninamivir, 35.0
o[] = saquinavir, 34.0
o[] = penciclovir, 33.0
o[] = telaprevir, 33.0
o[] = brincidofovir, 32.0
o[] = rupintrivir, 31.0
o[] = alisporivir, 30.0
o[] = vir, 30.0
o[] = raltegravir, 26.0
o[] = amprenavir, 25.0
o[] = boceprevir, 23.0
o[] = darunavir, 21.0
o[] = pneumovir, 21.0
o[] = atazanavir, 18.0
o[] = daclatasvir, 17.0
o[] = pirodavir, 17.0
o[] = baloxavir, 16.0
o[] = maribavir, 16.0
o[] = simeprevir, 16.0
o[] = zanamavir, 15.0
o[] = letermovir, 14.0
o[] = oseltamavir, 14.0
o[] = ledipasvir, 13.0
o[] = metavir, 13.0
o[] = sobrevivir, 13.0
o[] = dolutegravir, 12.0
o[] = gancyclovir, 11.0
o[] = ruprintrivir, 11.0
o[] = tipranavir, 11.0
o[] = vivir, 10.0
o[] = balapiravir, 9.0
o[] = fosamprenavir, 9.0
o[] = svanovir, 9.0
o[] = umifenovir, 9.0
o[] = elvitegravir, 8.0
o[] = netovir, 7.0
o[] = pimodivir, 7.0
o[] = pocapavir, 7.0
o[] = vapendavir, 7.0
o[] = velpatasvir, 7.0
o[] = carbovir, 6.0
o[] = celgosivir, 6.0
o[] = foscavir, 6.0
o[] = galidesivir, 6.0
o[] = presatovir, 6.0
o[] = dasabuvir, 5.0
o[] = elbasvir, 5.0
o[] = sigmovir, 5.0
o[] = convivir, 4.0
o[] = coronavir, 4.0
o[] = cyclopropavir, 4.0
o[] = hervir, 4.0
o[] = lobucavir, 4.0
o[] = amdoxovir, 3.0
o[] = beclabuvir, 3.0
o[] = boceprivir, 3.0
o[] = cabotegravir, 3.0
o[] = combivir, 3.0
o[] = danoprevir, 3.0
o[] = dbatvir, 3.0
o[] = entacavir, 3.0
o[] = ezvir, 3.0
o[] = famcyclovir, 3.0
o[] = glecaprevir, 3.0
o[] = grazoprevir, 3.0
o[] = navir, 3.0
o[] = osletamivir, 3.0
o[] = paritaprevir, 3.0
o[] = pritelivir, 3.0
o[] = racivir, 3.0
o[] = rupintivir, 3.0
o[] = tamivir, 3.0
o[] = alamifovir, 2.0
o[] = asunaprevir, 2.0
o[] = cidofivir, 2.0
o[] = cidovir, 2.0
o[] = ciluprevir, 2.0
o[] = dermavir, 2.0
o[] = elzevir, 2.0
o[] = envir, 2.0
o[] = famiciclovir, 2.0
o[] = fovir, 2.0
o[] = haavir, 2.0
o[] = hepavir, 2.0
o[] = holovir, 2.0
o[] = mirabavir, 2.0
o[] = mivir, 2.0
o[] = ombitasvir, 2.0
o[] = oncovir, 2.0
o[] = osteltamivir, 2.0
o[] = pencyclovir, 2.0
o[] = pibrentasvir, 2.0
o[] = remdisivir, 2.0
o[] = remidisvir, 2.0
o[] = retrovir, 2.0
o[] = trizivir, 2.0
o[] = valacylovir, 2.0
o[] = valgancyclovir, 2.0
o[] = vaniprevir, 2.0
o[] = vvir, 2.0
o[] = acilovir, 1.0
o[] = acycylovir, 1.0
o[] = acylovir, 1.0
o[] = adenovir, 1.0
o[] = alispovir, 1.0
o[] = anusaprevir, 1.0
o[] = aprenavir, 1.0
o[] = asunaprivir, 1.0
o[] = avir, 1.0
o[] = ayclovir, 1.0
o[] = balipiravir, 1.0
o[] = besofovir, 1.0
o[] = bictegravir, 1.0
o[] = boceproevir, 1.0
o[] = boceptrevir, 1.0
o[] = brecanavir, 1.0
o[] = camvir, 1.0
o[] = capvir, 1.0
o[] = casescidofovir, 1.0
o[] = celgosvir, 1.0
o[] = cellgosivir, 1.0
o[] = ciclofovir, 1.0
o[] = ciclopropavir, 1.0
o[] = cidfovir, 1.0
o[] = claninamivir, 1.0
o[] = cyclopropylcarbovir, 1.0
o[] = cyclovir, 1.0
o[] = dadclovir, 1.0
o[] = denotivir, 1.0
o[] = descyclovir, 1.0
o[] = diltiazemoseltamivir, 1.0
o[] = dimethoxytritylcidofovir, 1.0
o[] = donoprevir, 1.0
o[] = drodvir, 1.0
o[] = dvir, 1.0
o[] = elvitagravir, 1.0
o[] = epivir, 1.0
o[] = eurovir, 1.0
o[] = evir, 1.0
o[] = famvir, 1.0
o[] = faviparavir, 1.0
o[] = favivir, 1.0
o[] = fermavir, 1.0
o[] = ferrovir, 1.0
o[] = festinavir, 1.0
o[] = filociclovir, 1.0
o[] = filovir, 1.0
o[] = fostemsavir, 1.0
o[] = galdiesivir, 1.0
o[] = gancclovir, 1.0
o[] = gancidovir, 1.0
o[] = gancoclovir, 1.0
o[] = gangcyclovir, 1.0
o[] = gangiclovir, 1.0
o[] = gansiklovir, 1.0
o[] = gravir, 1.0
o[] = grazeprovir, 1.0
o[] = halovir, 1.0
o[] = hexadecyloxypropylcidofovir, 1.0
o[] = inavir, 1.0
o[] = indianavir, 1.0
o[] = influenzavir, 1.0
o[] = inhibitordasabuvir, 1.0
o[] = iniragivir, 1.0
o[] = laminamivir, 1.0
o[] = lanimamivir, 1.0
o[] = lanimavir, 1.0
o[] = levovir, 1.0
o[] = lopinavireritonavir, 1.0
o[] = lopinavirritonavir, 1.0
o[] = medivir, 1.0
o[] = megavir, 1.0
o[] = moribavir, 1.0
o[] = nevir, 1.0
o[] = nidovir, 1.0
o[] = nonabacavir, 1.0
o[] = norvir, 1.0
o[] = olsetamivir, 1.0
o[] = omaciclovir, 1.0
o[] = osaltamivir, 1.0
o[] = osehamivir, 1.0
o[] = oseltalmivir, 1.0
o[] = oseltamivirzanamivir, 1.0
o[] = oseltamvir, 1.0
o[] = osetalmavir, 1.0
o[] = osetalmivir, 1.0
o[] = oxivir, 1.0
o[] = ozeltamivir, 1.0
o[] = peramavir, 1.0
o[] = primavir, 1.0
o[] = priodavir, 1.0
o[] = prodrugvalganciclovir, 1.0
o[] = provir, 1.0
o[] = pvir, 1.0
o[] = rabivir, 1.0
o[] = ravidasvir, 1.0
o[] = redexivir, 1.0
o[] = regavir, 1.0
o[] = remdesevir, 1.0
o[] = remsdesivir, 1.0
o[] = resvir, 1.0
o[] = ribavir, 1.0
o[] = rupintruvir, 1.0
o[] = ruprintivir, 1.0
o[] = samatasvir, 1.0
o[] = sequinavir, 1.0
o[] = silvir, 1.0
o[] = simeprivir, 1.0
o[] = simprevir, 1.0
o[] = sisunatovir, 1.0
o[] = sofobuvir, 1.0
o[] = sofosbovir, 1.0
o[] = sosfobuvir, 1.0
o[] = sovaprevir, 1.0
o[] = svir, 1.0
o[] = tanamivir, 1.0
o[] = tegobuvir, 1.0
o[] = telaprivir, 1.0
o[] = telatrevir, 1.0
o[] = tenefovir, 1.0
o[] = tenovovir, 1.0
o[] = togavir, 1.0
o[] = valayclovir, 1.0
o[] = valganciclavir, 1.0
o[] = valgangciclovir, 1.0
o[] = valomaciclovir, 1.0
o[] = voxilaprevir, 1.0
o[] = zanamiavir, 1.0
o[] = zanamiviroseltamivir, 1.0
o[] = zanamvir, 1.0
o[] = zanarnivir, 1.0
o[] = zanmavir, 1.0
o[] = zintevir, 1.0
o[] = ziresovir, 1.0

Compilation

Status: Finished
Started: Tue, 31 Mar 2020 12:34:21 -0500
Finished: Tue, 31 Mar 2020 12:34:26 -0500 (5s)

Execution

Status: Finished
Started: Tue, 31 Mar 2020 12:34:39 -0500
Finished: Tue, 31 Mar 2020 12:35:01 -0500 (22s)